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Publications
The project has already begun dissemination of early results and findings from the project in the form of a number of publications, including posters, presentations and papers.
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Aitken, J.S., Korf, R., Webber, B.L. and Bard, J.B.L. (2004a) COBrA: A Bio-Ontology Editor. Bioinformatics. In press - doi: 10.1093/bioinformatics/bti097
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| Aitken, J.S. (2005 submitted) Formalising concepts of species, sex and developmental stage in anatomical ontologies. Submitted to Bioinformatics. |
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| Aitken, J.S., Webber, B.L. and Bard J.B.L. (2004b) Part-of Relations in Anatomy Ontologies: A Proposal for RDFS and OWL Formalisations. Proc PSB 9 :166-177. |
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| Baldock R, Burger A (2004) Anatomical ontologies: names and places in biology. Genome Biology in press |
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| Bard, J.B.L. (2002) Growth and death in the developing mouse kidney: signals receptors and conversations. BioEssays, 24, 72-82. |
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| Bard, J.B.L. (2005) Anatomics: the intersection of anatomy and bioinformatics. J. Anatomy. In press. |
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| Bard, J.B.L and Rhee S.Y. (2004) Bio-ontologies and the linking of phenotypes to genotypes. Nature Review Genetics, 5, 213-222. |
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| Bard, J.B.L, Rhee, S.Y. and Ashburner, M. (2005) An ontology for cell types. Genome Biol. In press. |
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| Burger A, Davidson D, Baldock R (2003) Formalization of mouse embryo anatomy, Bioinformatics 19, 1-9. |
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| Burger A, Davidson D, Yang Y, Baldock R, (2004) Integrating partonomic hierarchies in anatomy ontologies, BMC Bioinformatics 5:184. |
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| Dadzie A-S, Burger A, (2004) The merits of third dimension for visual analysis of muliple anatomy ontologies, Proc. International Conference on Bioinformatics and its Applications (ICBA’04). |
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| Luger, S. and Aitken, J.S. (2004) Cross-species Mapping between Anatomical Ontologies Based on Lexico-syntactic Properties. Poster C-40, ISMB-04. |
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| Luger, S., Aitken, J.S. and Webber B.L. (2004) Cross-species Mapping between Anatomical Ontologies: Terminological and Structural Support. Proc. Bio-Ontology Workshop 30 July 2004 at ISMB 04, Glasgow. |
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| Parkinson, H., Aitken, S., Bard, J., Burger, A. and 9 other authors. The SOFG Anatomy Entry List (SAEL): an annotation tool for functional genomics data. Comp. Funct. Genom.in press. |
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| Posters: |
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Download .pdf version of poster here
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Presentation for The Seventh Annual
Bio-ontologies Meeting
Glasgow, July 2004
Presented by:
S. Luger. |
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Poster for BBSRC Project Progress Meeting and NIH Meeting
October 2003
Presented by:
Dr. A. Burger, Prof. J. Bard, Prof. B. Webber
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Poster for BBSRC Project Progress Meeting
September 2002
Presented by:
Dr. A. Burger
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